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UMR DGIMI Diversité, génomes interactions microorganismes-insectes

Publications et brevets

Production scientifique depuis 2006

2018

Rizk F, Laverdure S, d'Alencon E, Bossin H, Dupressoir T: Linear Lepidopteran ambidensovirus 1 sequences drive random integration of a reporter gene in transfected Spodoptera frugiperda cells. PeerJ 2018, 6:e4860.2.118-2.469.

Orsucci M, Moné Y, Audiot P, Gimenez S, Nhim S, Nait-Saidi R, Frayssinet M, Dumont G, Pommier A, Boudon JP et al: Transcriptional plasticity evolution in two strains of Spodoptera frugiperda (Lepidoptera: Noctuidae) feeding on alternative host-plants. BioRxiv 2018.

Chen ZH, Zhang M, Lv FH, Ren X, Li WR, Liu MJ, Nam K, Bruford MW, Li MH: Contrasting Patterns of Genomic Diversity Reveal Accelerated Genetic Drift but Reduced Directional Selection on X-Chromosome in Wild and Domestic Sheep Species. Genome Biol Evol 2018, 10(5):1282-1297.3.94-4.171.

2017

Nam K, Munch K, Mailund T, Nater A, Greminger MP, Krutzen M, Marques-Bonet T, Schierup MH: Evidence that the rate of strong selective sweeps increases with population size in the great apes. Proc Natl Acad Sci U S A 2017, 114(7):1613-1618.9.504-10.359.

Nam K, Lee KW, Chung O, Yim HS, Cha SS, Lee SW, Jun J, Cho YS, Bhak J, Magalhaes JP et al: Analysis of the FGF gene family provides insights into aquatic adaptation in cetaceans. Scientific reports 2017, 7:40233.4.122-4.609.

Gouin A, Bretaudeau A, Nam K, Gimenez S, Aury JM, Duvic B, Hilliou F, Durand N, Montagne N, Darboux I et al: Two genomes of highly polyphagous lepidopteran pests (Spodoptera frugiperda, Noctuidae) with different host-plant ranges. Scientific reports 2017, 7(1):11816.4.122-4.609.

Erclik T, Li X, Courgeon M, Bertet C, Chen Z, Baumert R, Ng J, Koo C, Arain U, Behnia R et al: Integration of temporal and spatial patterning generates neural diversity. Nature 2017, 541(7637):365-370.41.577-44.958.

Cheng T, Wu J, Wu Y, Chilukuri RV, Huang L, Yamamoto K, Feng L, Li W, Chen Z, Guo H et al: Genomic adaptation to polyphagy and insecticides in a major East Asian noctuid pest. Nature ecology & evolution 2017.

Bonneaud N, Layalle S, Colomb S, Jourdan C, Ghysen A, Severac D, Dantec C, Negre N, Maschat F: Control of nerve cord formation by Engrailed and Gooseberry-Neuro: A multi-step, coordinated process. Dev Biol 2017, 432(2):273-285.3.262-3.29.

2016

Munch K, Nam K, Schierup MH, Mailund T: Selective Sweeps across Twenty Millions Years of Primate Evolution. Mol Biol Evol 2016, 33(12):3065-3074.6.202-14.558.

Lobon I, Tucci S, de Manuel M, Ghirotto S, Benazzo A, Prado-Martinez J, Lorente-Galdos B, Nam K, Dabad M, Hernandez-Rodriguez J et al: Demographic History of the Genus Pan Inferred from Whole Mitochondrial Genome Reconstructions. Genome Biol Evol 2016, 8(6):2020-2030.3.979-4.008.

2015

Simon, J.-C., d'Alençon, E., GUY, E., Jacquin-Joly, E., Jaquiéry, J., Nouhaud, P., Peccoud, J., Sugio, A., Streiff, R. (2015). Genomics of adaptation to host-plants in herbivorous insects. Briefings in functional genomics, 14 (6), 413-423. DOI : 10.1093/bfgp/elv015.

DUMAS, P. , Legeai, F., Lemaitre, C., Scaon, E., ORSUCCI, M., Labadie, K., Gimenez, S., Clamens, A. L., Henri, H., Vavre, F., Aury, J. M., Fournier, P., Kergoat, G., D'Alençon, E. (2015). Spodoptera frugiperda (Lepidoptera: Noctuidae) host-plant variants: two host strains or two distinct species?. Genetica, 143 (3), 305-316. DOI : 10.1007/s10709-015-9829-2.

Dumas, P. , Barbut, J., Le Ru, B., Silvain, J.-F., Clamens, A. L., D'Alençon, E., Kergoat, G. (2015). Phylogenetic molecular species delimitations unravel potential new species in the pest genus Spodoptera Guenée, 1852 (Lepidoptera, Noctuidae). Plos One, 10 (4), e0122407. DOI : 10.1371/journal.pone.0122407.

2014

Tagu D, Colbourne JK, Nègre N. (2014). Genomic data integration for ecological and evolutionary traits in non-model organisms. BMC Genomics.  Jul 17;15:490. doi: 10.1186/1471-2164-15-490. PMID: 25047861.

2013

d’Alençon, E., Bierne, N., Girard, A., Magdelenat, G., Gimenez, S., Seninet, S., and Escoubas, J.M. (2013). Evolutionary history of x-tox genes in three Lepidopteran species: origin, primary and secondary structure evolution and alternative splicing generated a repertoire of immune related proteins. Insect Biochem Mol Biol. 43:54-64.

2012

Dumas, P., Clamens, A.-L., Kergoat, G.J., Gimenez, S., and d’Alençon, E.(2012). Isolation and characterization of microsatellite loci in the fall armyworm, Spodoptera frugiperda (Lepidoptera, Noctuidae). In : Permanent Genetic Ressources added to Molecular Ecology Resources Database 1 December 2011 – 31 January 2012. Molecular Ecology Resources. 12, 570-572. http://tomato.bio.trinity.edu/manuscripts/12-3/mer-11-0382.pdf.

2011

d’Alençon, E., Stanojcic, S., Cousserans, F., Gimenez, S., Fournier, P., Quesneville, H., Permal, E. 2011. « Molécules utiles pour inhiber le développement d’une larve d’insecte ravageur de culture » Brevet européen 11/01/2011.

Stanojcic, S., Gimenez, S., Permal, E., Quesneville, H., Fournier, P., and d'Alençon, E.(2011). Correlation of rasiRNA expression with heterochromatin formation during development of the holocentric insect Spodoptera frugiperda. PLoS One, 6, e24746.

d’Alençon, E., Nègre, N., Stanojcic, S., Alassoeur, B., Gimenez, S., Abd-Alla, A., Juliant, S., and Fournier, P. (2011). Characterization of a CENP-B homolog in the holocentric Lepidoptera Spodoptera frugiperda. Gene. 485:91-101.

2010

d’Alençon, E., Sezutsu, H., Legeai, F., Permal, E., Bernard-Samain, S., Gimenez, S., Gagneur, C., Cousserans, F., Shimomura, M., Brun-Barale, A. et al. 2010. Extensive synteny conservation of holocentric chromosomes in Lepidoptera despite high rates of local genome rearrangements. PNAS 107(17): 7680-7685.

2006

Negre, V., Hotelier, T., Volkoff, A.N., Gimenez, S., Cousserans, F., Mita, K., Sabau, X., Rocher, J., Lopez-Ferber, M., d'Alencon, E. et al. 2006. SPODOBASE : an EST database for the lepidopteran crop pest Spodoptera. BMC Bioinformatics 7(1): 322.