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Activités - Fonctions

Objet thématique de rattachement : DIEM

Thématiques de recherche : 

• Diversité microbienne
• Bioaérosols
• Biomimétisme
• Rôle de la prédation dans la survie de pathogènes, virus, etc
• Evolution dirigée

Projets

• ANR : BIOFIME, DEFI H12, DISCO, DANAC, CreativERU
• Projet ANSES: BIODISPAIR
• Projet REI : Caractérisation de la diversité microbienne « bruit de fond », de l’air des espaces clos

Parcours scientifique

• Depuis 2013 : Directeur de Recherche 1^ère classe au Laboratoire de Biotechnologie de l’Environnement de l’INRA à Narbonne.

• 2002-2012 : Directeur de Recherche 2^ème classe au Laboratoire de Biotechnologie de l’Environnement de l’INRA à Narbonne.

• 2001 : Habilitation à Diriger des Recherches, Université de Toulouse

• 1994-2001 : Chargé de Recherche 1^ère classe au Laboratoire de Biotechnologie de l’Environnement de l’INRA à Narbonne. Responsable de l’équipe Instrumentation, modélisation, commande et diagnostic des procédés.
• 1993-1994 : Stage post-doctoral Department of Genetics and Microbiology, Institute of Food Research, AFRC, Norwich, Angleterre. Sujet : Etude du facteur sexuel chez Lactococcus lactis.

• 1989-1992: Doctorat d'Université. Université Paris XI, Orsay, Laboratoire de Génétique microbienne, INRA, Jouy en Josas. Sujet :  Régulation génétique de la synthèse des acides aminés branchés chez Lactococcus lactis

Publications

• Total (sept 2017) :  142 articles dans des revues à comité de lecture
• Web of Science :      H-index : 34 et 4911 citations

Publications récentes

• Bouchez, T., Blieux, A. L., Dequiedt, S., Domaizon, I., Dufresne, A., Ferreira, S., Godon, J. J., Hellal, J., Joulian, C., Quaiser, A., Martin-Laurent, F., Mauffret, A., Monier, J. M., Peyret, P., Schmitt-Koplin, P., Sibourg, O., D’oiron, E., Bispo, A., Deportes, I., Grand, C., Cuny, P., Maron, P. A., and Ranjard, L. 2016. Molecular microbiology methods for environmental diagnosis. Environmental Chemistry Letters,. 14 (4): 423-441
• Godon, J.-J., Arulazhagan, P., Steyer, J.-P., and Hamelin, J. 2016. Vertebrate bacterial gut diversity: size also matters. BMC ecology,  16(1):12. 
• Resende, J., Godon, J.-J., Bonnafous, A., Arcuri, P., Silva, V., Otenio, M., and Diniz, C. 2016. Seasonal Variation on Microbial Community and Methane Production during Anaerobic Digestion of Cattle Manure in Brazil. Microbial Ecology,  71(3):735-746. 
• Wade, M. J., Harmand, J., Benyahia, B., Bouchez, T., Chaillou, S., Cloez, B., Godon, J. J., Moussa Boudjemaa, B., Rapaport, A., Sari, T., Arditi, R., and Lobry, C. 2016. Perspectives in mathematical modelling for microbial ecology. Ecological Modelling,  321:64-74.
• Bize, A., Cardona, L., Quéméner, E. D.-L., Battimelli, A., Badalato, N., Bureau, C., Madigou, C., Chevret, D., Guillot, A., Monnet, V., Godon, J.-J., and Bouchez, T. 2015. Shotgun metaproteomic profiling of biomimetic anaerobic digestion processes treating sewage sludge. PROTEOMICS,  15(20 (SI special issue)):3532-3543. 
• Gales, A., Bru-Adan, V., Godon, J. J., Delabre, K., Catala, P., Ponthieux, A., Chevallier, M., Birot, E., Steyer, J. P., and Wery, N. 2015. Predominance of single bacterial cells in composting bioaerosols. Atmospheric Environment,  107:225-232. 
• Pierra, M., Carmona-Martinez, A. A., Trably, E., Godon, J. J., and Bernet, N. 2015. Microbial characterization of anode-respiring bacteria within biofilms developed from cultures previously enriched in dissimilatory metal-reducing bacteria. Bioresource Technology,  195:283-287. 
• Gales, A., Latrille, E., Wery, N., Steyer, J.-P., and Godon, J.-J. 2014. Needles of Pinus halepensis as Biomonitors of Bioaerosol Emissions. PloS one,  9(11):e112182.

• Gauzere, C., Moletta-Denat, M., Blanquart, H., Ferreira, S., Moularat, S., Godon, J. J., and Robine, E. 2014. Stability of airborne microbes in the Louvre Museum over time. Indoor Air,  24(1):29-40. 
• Haegeman, B., Sen, B., Godon, J.-J., and Hamelin, J. 2014. Only Simpson Diversity can be Estimated Accurately from Microbial Community Fingerprints. Microbial Ecology:1-4. 
• Resende, J. A., Diniz, C. G., Silva, V. L., Otenio, M. H., Bonnafous, A., Arcuri, P. B., and Godon, J. J. 2014. Dynamics of antibiotic resistance genes and presence of putative pathogens during ambient temperature anaerobic digestion. Journal of Applied Microbiology,  117(6):1689-1699. 
• Godon, J.-J., Arcemisbéhère, L., Escudié, R., Harmand, J., Miambi, E., and Steyer, J.-P. 2013. Overview of the oldest existing set of substrate-optimized anaerobic processes: digestive tracts. BioEnergy Research,  6(3):1063-1081. 

Publications majeures

• Le Goff, O., Bru-Adan, V., Bacheley, H., Godon, J.-J., and Wéry, N. 2010. The microbial signature of aerosols produced during the thermophilic phase of composting. Journal of Applied Microbiology, 108(1):325-340. DOI: 10.1111/j.1365-2672.2009.04427.x
• Rochex, A., Godon, J.-J., Bernet, N., and Escudié, R. 2008. Role of shear stress on composition, diversity and dynamics of biofilm bacterial communities. Water Research, 42(20):4915-4922.DOI: 10.1016/j.watres.2008.09.015
• Moletta, M., Delgenès, J.-P., and Godon, J.-J. 2007. Differences in the aerosolization behavior of microorganisms as revealed through their transport by biogas. Science of The Total Environment, 379(1):75-88. DOI: 10.1016/j.scitotenv.2007.02.019
• Loisel, P., Harmand, J., Zemb, O., Latrille, E., Lobry, C., Delgenès, J. P., and Godon, J. J. 2006. Denaturing gradient electrophoresis (DGE) and single-strand conformation polymorphism (SSCP) molecular fingerprintings revisited by simulation and used as a tool to measure microbial diversity. Environmental Microbiology, 8(4):720-731. DOI: 10.1111/j.1462-2920.2005.00950.x
• Snell Castro, R., Godon, J.-J., Delgenès, J.-P., and Dabert, P. 2005. Characterisation of the microbial diversity in a pig manure storage pit using small subunit rDNA sequence analysis. FEMS Microbiology Ecology, 52:229-242. DOI: 10.1016/j.femsec.2004.11.016
• Godon, J.-J., Morinière, J., Moletta, M., Gaillac, M., Bru, V., and Delgenès, J.-P. 2005. Rarity associated with specific ecological niches in the bacterial world : the "Synergistes" example. Environmental Microbiology, 7(2):213-224. DOI: 10.1111/j.1462-2920.2004.00693.x
• Zumstein, E., Moletta, R., and Godon, J.-J. 2000. Examination of two years of community dynamics in an anaerobic bioreactor using fluorescence polymerase chain reaction (PCR) single-strand conformation polymorphism analysis.
• Godon, J.-J., Zumstein, E., Dabert, P., Habouzit, F., and Moletta, R. 1997. Molecular microbial diversity of an anaerobic digestor as determined by Small-Subunit rDNA sequence analysis. Applied and Environmental Microbiology, 63(7):2802-2813.
• Godon, J.-J., K. Jury, C.A. Shearman, M.J. Gasson. 1994. The Lactococcus lactis sex-factor aggregation gene cluA.Molecular Microbiology. 12, 655-663.
• Godon, J.-J., M.-C. Chopin, S.D. Ehrlich. 1992. Genes for branched amino acid blosynthesis in Lactococcus lactis subsp. lactis.Journal of Bacteriology. 174, 6580-6589.