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Publications

2016 publications (with thematic group and technical platform) (updated March 31 2017)

2015 publications (with Thematic group)

publications 2015 lab BIOPASS (Dakar)

publications 2016 lab BIOPASS (Dakar)

2014 publications

2013 publications

2008-June 2013 publications (AERES report 2013)

2008-2017 PhD theses (see also Current PhD students)

2017 publications (last update: November 10)

Peer-reviewed journal articles (referenced in Web of Science)

Aberlenc H.P. 2017. Qu’est-ce qu’un Coléoptère ? . In: Gomy Y.G., Lemagnen R. & Poussereau J., eds. Les Coléoptères de l'île de la Réunion: Parc national de la Réunion & Éditions Orphie (sous presse) (GT Origine et caractérisation de la biodiversité)

Aït Hamza M., Lakhtar H., Tazi H., Moukhli A., Fossati-Gaschignard O., Miché L., Roussos S., Ferji Z., El Mousadik A., Mateille T. & Boubaker H.C.-l. 2017. Diversity of nematophagous fungi in Moroccan olive nurseries: Highlighting of prey-predator interactions and of efficient strains against root-knot-nematodes. Biological Control 114: 14-23 (http://dx.doi.org/10.1016/j.biocontrol.2017.07.011) (GT Origine et caractérisation de la biodiversité)

Albouy C., Delattre V.L., Mérigot B., Meynard C.N. & Leprieur F. 2017. Multi-component biodiversity hotspots of marine mammals for conservation priorities. Diversity & Distributions 23: 615-626 (http://dx.doi.org/10.1111/ddi.12556) (GT Origine et caractérisation de la biodiversité)

Ali N., Tavoillot J., Besnard G., Khadari B., Dmowska E., Winiszewska G., Fossati-Gaschignard O., Aït Hamza M., El Mousadik A.E.O., A., Moukhli A., Essalouh L., El Bakkali A., Chapuis E. & Mateille T. 2017. How anthropogenic changes may affect soil-borne parasite diversity? Plant-parasitic nematode communities associated with olive trees in Morocco as a case study. BMC Ecology 17, 4 (doi: 10.1186/s12898-016-0113-9)(GT Origine et caractérisation de la biodiversité)

Amsellem A., Brouat C., Duron O. et al. 2017. Importance of microorganisms to macroorganisms invasions — Is the essential invisible to the eye? Advances in Ecological Research 57: 99-146 (GT Biologie, écologie et évolution des espèces envahissantes)

André A., Millien V., Galan M., Ribas A. & Michaux J.R. 2017. Effects of parasite and historic driven selection on the diversity and structure of a MHC-II gene in a small mammal species (Peromyscus leucopus) undergoing range expansion. Evolutionary Ecology (http://dx.doi.org/10.1007/s10682-017-9898-z) (GT Biologie, écologie et évolution des espèces envahissantes et GT Approches moléculaires et bioinformatiques haut débit)

Bennett E.A., Champlot S., Peters J., Arbuckle B.S., Guimaraes S., Pruvost M., Bar-David S., Davis S.J.M., Gautier M., Kaczensky P., Kuehn R., Mashkour M., Morales-Muñiz A., Pucher E., Tournepiche J.F., Uerpmann H.P., Bălăşescu A., Germonpré M., Gündem C.Y., Hemami M.R., Moullé P.E., Ötzan A., Uerpmann M., Walzer C., Grange T. & Geigl E.M. 2017. Taming the late Quaternary phylogeography of the Eurasiatic wild ass through ancient and modern DNA. PLoS ONE 12 (4): e0174216 (GT Origine et caractérisation de la biodiversité)

Berardi L., Pivato M., Arrigoni G., Mitali E., Trentin A.R., Olivieri M., Kerdelhué C.,Dorkeld F., Nidelet S., Dubois E., Battisti A. & Masi A. 2017. Proteome analysis of urticating setae from Thaumetopoea pityocampa (Lepidoptera: Notodontidae)  (online early). Journal of Medical Entomology 54 (6): 1560-1566 (http://dx.doi.org/10.1093/jme/tjx144) (GT Adaptation des phytophages, de leurs ennemis naturels et de leurs symbiontes ; PT Biologie moléculaire ; PT Informatique)

Biffi M., Gillet, Laffaille P., Colas F., Aulagnier S., Blanc F., Galan M., Tiouchichine M.L., Némoz M., Buisson L. & Michaux J.R. 2017. Novel insights into the diet of the Pyrenean desman (Galemys pyrenaicus) using next-generation sequencing molecular analyses. Journal of Mammalogy (sous presse) (http://dx.doi.org/10.1093/jmammal/gyx070) (GT Origine et caractérisation de la biodiversité et GT Approches moléculaires et bioinformatiques haut débit)

Blandin P., Aberlenc H.-P., Bauvet C., Bianchin N., Cockle-Bétian A., Couté A., Deso G., Duguet R., Gaymard M., Holtof J.F., Hugonnot V., Ladet A., Lagarde F., Lhermenier W., Lhomme M., Morin D., Perrette C., Richard F. & Schwaab F. 2017 (2016). L’écocomplexe de Païolive en Ardèche méridionale (France) : un pic de biodiversité du hotspot méditerranéen. The Païolive ecocomplex in southern Ardèche (France): a biodiversity peak in the Mediterranean hotspot. Oecologia Mediterranea 42 (2): 51-95 (GT Origine et caractérisation de la biodiversité)

Boratyński Z., Brito J.C., Campos J.C., Cunha J.L., Granjon L., Mappes T., Ndiaye A., Rzebik-Kowalska B. & Serén N. 2017. Repeated evolution of camouflage in speciose desert rodents. Scientific Reports 7: 3522 (http:/:dx.doi.org/10.1038/s41598-017-03444-y) (GT Origine et caractérisation de la biodiversité) (PT Biologie moléculaire et PT Collections)

Bourgeois Y.X.C., Delahaie B., Gautier M., Lhuillier E., Male P.J.G., Bertrand J.A.M., Cornuault J., Wakamatsu K., Bouchez O., Mould C., Bruxaux J., Holota H., Mila B. & Thebaud C. 2017. A novel locus on chromosome 1 underlies the evolution of a melanic plumage polymorphism in a wild songbird. Royal Society Open Science 4 (2): 14 (http://dx.doi.org/10.1098/rsos.160805) (hors GT)

Branco M., Paiva M.R., Santos H., Burban C. & Kerdelhué C. 2017. Experimental evidence for heritable reproductive time in two allochronic populations of pine processionary moth. Insect Science 24 (2): 325-335 (doi:10.1111/1744-7917.12287)  (GT Adaptation des phytophages, de leurs ennemis naturels et de leurs symbiontes)

Budde K.B., González-Martínez S.C., Navascués M., Burgarella C., Mosca E., Lorenzo Z., Zabal-Aguirre M., Vendramin G.G., Verdú M., Pausas J.G. & Heuertz M. 2017. Increased fire frequency promotes stronger spatial genetic structure and natural selection at regional and local scales in Pinus halepensis Mill. Annals of Botany (sous presse) (doi: 10.1093/aob/mcw286) (GT Origine et caractérisation de la biodiversité)

Castel G., Tordo N. & Plyusnin A. 2017. Estimation of main diversification time-points of hantaviruses using phylogenetic analyses of complete genomes Virus Research 233: 60-69 (http://dx.doi.org/10.1016/j.virusres.2017.03.011)(GT Ecologie et évolution des zoonoses)

Chapuis M.P., Foucart A., Plantamp P., Blondin L., Leménager N., Benoit L., Gay P.E. & Bazelet C.S. 2017. Genetic and morphological variation in non-polyphenic southern African populations of the desert locust. African Entomology 25(1): 13-23 (GT Origine et caractérisation de la biodiversité)

Chatti A., Kreiter S., Lebdi-Grissa K. & Ksantini M. 2017. Phytophagous and predatory mites on olive trees in Tunisia. Catalogue, description of one new species and key for identification (Acari, Eriophyidae, Tetranychidae, Tenuipalpidae and Phytoseiidae. Acarologia 57 (2): 233-254 (GT Origine et caractérisation de la biodiversité)

Chelsea L., Chapuis M.P., Blondin L., Chapuis E.* & Jourdan-Pineau H.* (* equal contributors). 2017. Exploring the relationship between tychoparthenogenesis and inbreeding depression in the Desert Locust, Schistocerca gregaria. Ecology and Evolution (sous presse) (http://dx.doi.org/10.1002/ece3.3103) (GT Adaptation des phytophages, de leurs ennemis naturels et de leurs symbiontes)

Chvojka P. & Gibon F.M. 2017. New species of Tinodes from Madagascar (Trichoptera, Psychomyiidae). Zootaxa 4318 (2): 364-376 (GT Origine et caractérisation de la biodiversité)

Ciabrelli F., Comoglio F., Fellous S., Bonev B., Ninova M., Szabo Q., Xuéreb A., Klopp C., Aravin A., Paro R., Bantignies F. & Cavalli G. Stable Polycomb-dependent transgenerational inheritance of chromatin states in Drosophila. Nature Genetics 876-886 (http://dx.doi.org/10.1038/ng.3848) (GT Adaptation des phytophages, de leurs ennemis naturels et de leurs symbiontes)

Cruaud P., Rasplus J.Y., Rodriguez L.J. & Cruaud A. 2017. High throughput sequencing of multiple amplicons for barcoding and integrative taxonomy. Scientific Reports (acceptée) (GT Origine et caractérisation de la biodiversité)

Delvare G., Heimpel G.E., Baur H., Chadee D.D., Martinez R. & Knutie S.A. Description of Brachymeria philornisae sp. n. (Hymenoptera: Chalcididae), a parasitoid of the bird parasite Philornis trinitensis (Diptera: Muscidae) in Tobago, with a review of the sibling species. Zootaxa 4242 (1): 034-060 (10.11646/zootaxa.4242.1.2) (GT Origine et caractérisation de la biodiversité)

Delvare G. & Huchet J.B. 2017. Brachymeria mochica, a new Neotropical species of Chalcididae (Hymenoptera: Chalcidoidea) discovered on the archaeological site of Huacas de Moche, Peru with a review of related species. Zootaxa 4290 (1): 43-60 (http://dx.doi.org/10.11646/zootaxa.4290.1.2) (GT Origine et caractérisation de la biodiversité)

Denux O., Dauffy-Richard E., Rossi J.P. & Augustin S. 2017. Rediscovery of the endangered species Harpalus flavescens (Coleoptera: Carabidae) in the Loire River. Insect Conservation and Diversity (sous presse) (http://dx.doi.org/10.1111/icad.12228) (GT Origine et caractérisation de la biodiversité)

Diagne C., Gilot-Fromont E., Cornet S., Husse L., Doucouré S., Dalecky A., Bâ K., Kane M., Niang Y., Diallo M., Sow A., Fossati-Gaschignard O., Piry S., Artige E., Sembène M., Brouat C. & Charbonnel N. 2017. Contemporary evolution of immunity during range expansion of two invasive rodents in Senegal. Oikos (sous presse) (http://dx.doi.org/10.1111/oik.03470) (GT Ecologie et évolution des zoonoses ; GT Biologie, écologie et évolution des espèces envahissantes)

Diagne C.A., Galan M., Tamisier L., d'Ambrosio J., Dalecky A., Bâ K., Kane M., Niang Y., Diallo M., Sow A., Gauthier P., Tatard C., Loiseau A., Piry S., Sembène M., Cosson J.F., Charbonnel N. & Brouat C. 2017. Ecological and sanitary impacts of bacterial communities associated to biological invasions in African commensal rodent communities. Scientific Reports 17: 14995 (GT Ecologie et évolution des zoonoses et GT Biologie, écologie et évolution des espèces envahissantes)

Diagne M.M., Faye M., Faye O., Sow A., Balique F., Sembene M., Granjon L., Handschumacher P., Faye O., Diallo M. & Sall A.A. 2017. Emergence of Wesselsbron virus among black rat and humans in Eastern Senegal in 2013. One Health 3: 23-28 (http://dx.doi.org/10.1016/j.onehlt.2017.02.001) (GT Ecologie et évolution des zoonoses)

Diagne C.A., Charbonnel N., Henttonen H., Sironen T. & Brouat C. 2017. Serological survey of zoonotic viruses in invasive and native commensal 1 rodents in Senegal, West Africa. Vector-Borne and Zoonotic Diseases (sous presse) (GT Ecologie et évolution des zoonoses)

Dkhili J., Berger U., Idrissi Hassani L.M., Ghaout S., Peters R. & Piou C. 2017. Self-organized spatial structures of locust groups emerging from local interaction. Ecological Modelling 361: 26-40 (10.1016/j.ecolmodel.2017.07.020) (premier chapitre de la Thèse de Jamila Dkhili) (GT Biologie, écologie et évolution des espèces envahissantes)

Dobigny G., Britton-Davidian J. & Robinson T.J. 2017. Chromosomal polymorphism in mammals: an evolutionary perspective. Biological Reviews (revue hybride) (sous presse) (doi:10.1111/brv.12213) (GT Origine et caractérisation de la biodiversité)

Dos Santos V. & Tixier M.-S. 2017. Molecular markers for analysing phylogenetic relationships within the mite family Phytoseiidae (Acari: Mesostigmata) Cladistics 33(3): 251-267 (GT Origine et caractérisation de la biodiversité)

Druet T. & Gautier M. 2017. A model-based approach to characterize individual inbreeding at both global and local genomic scales. Molecular Ecology (accepté) (biorXiv preprint http://dx.doi.org/10.1101/106765) (GT Génomique statistique et évolutive des populations)

Dubois A., Castel G., Murri S., Pulido C., Pons J.B., Benoit L., Loiseau A., Lakhdar L., Galan M., Charbonnel N. & Marianneau P. 2017. Experimental infections of wild bank voles (Myodes glareolus) from nephropatia epidemica endemic and non-endemic regions revealed slight differences in Puumala virological course and immunological responses. Virus Research (accepté) (http://dx.doi.org/10.1016/j.virusres.2017.04.004)(GT Ecologie et évolution des zoonoses)

Dubois A., Galan M., Cosson J.F., Gauffre B., Henttonen H., Niemimaa J., Razzauti M., Voutilainen L., Vitalis R., Guivier E. & Charbonnel N. 2017. Microevolution of Bank voles (Myodes glareolus) at Neutral and Immune-Related Genes During a Multi-Annual Complete Dynamic Cycle : consequences for Puumala hantavirus epidemiology. Infection Genetics and Evolution 49: 318-329 (doi:10.1016/j.meegid.2016.12.007) (GT Ecologie et évolution des zoonoses & GT Génomique statistique et évolutive des populations + PT BM + PT Bio INFO)

Enrique Hernández-Tecles E., de las Heras J., Lorenzo Z., Navascués M. & Ricardo Alía R. 2017. Identification of gene pools used in restoration and conservation by chloroplast microsatellite markers in Iberian pine species. Forest Systems 26 (2): e05S (http://dx.doi.org/10.5424/fs/2017262-9030) (GT Génomique statistique et évolutive des populations)

Eoche-Bosy D., Gautier M., Esquibet M., Legeai F., Bretaudeau A., Bouchez O., Fournet S., Grenier E. & Montarry J. 2017. Genome scans on experimentally evolved populations reveal candidate regions for adaptation to plant resistance in the potato cyst nematode Globodera pallida. Molecular Ecology (sous presse) (GT Génomique statistique et évolutive des populations)

Farache F.H.A., Cruaud A., Genson G., Rasplus J.-Y. & Pereira R.A.S. 2017. Taxonomic revision and molecular phylogenetics of the Idarnes incertus species group (Hymenoptera, Agaonidae, Sycophaginae) PeerJ 5: e2842 (GT Origine et caractérisation de la biodiversité)

FAW Consortium. 2017 ([ce consortium regroupe 65 chercheurs inclus G. Kergoat et S. Nidelet). 2017. Two genomes of highly polyphagous lepidopteran pests (Spodoptera frugiperda, Noctuidae) with different host-plant ranges. Scientific Reports (accepté) (GT Origine et caractérisation de la biodiversité)

Fontaine M.C., Thatcher O., Ray N., Piry S., Brownlow A., Davison N.J., Jepson P., Deaville R. & Goodman S.J. 2017. Mixing of porpoise ecotypes in southwestern UK waters revealed by genetic profiling. Royal Society Open Science 4 (3): 14 (http://dx.doi.org/10.1098/rsos.160992) (GT Génomique statistique et évolutive des populations)

Frachon L., Libourel C., Villoutreix R., Carrère S., Glorieux C., Huard-Chauveau C., Navascués M., Gay L., Vitalis R., Bron E., Amsellem L., Bouchez O., Vidal M., Le Corre V., Roby D., Bergelson J. & Roux F. 2017. Intermediate degrees of synergistic pleiotropy drive adaptive evolution in ecological time. Nature Ecology & Evolution (sous presse) (GT Génomique statistique et évolutive des populations)

Fraimout A., Debat V., Fellous S., Hufbauer R., Foucaud J., Pudlo P., Marin J.M., Price D.K., Cattel J., Chen X., Depra M., Duyck P.F., Guedot C., Kenis M., Kimura M.T., Loeb G., Loiseau A., Martinez-Sanudo I., Pascual M., Richmond M.P., Shearer P., Singh N., Ytamura K., Xuéreb A., Zhang J. & Estoup A. 2017. Deciphering the Routes of invasion of Drosophila suzukii by Means of ABC Random Forest. Molecular Biology and Evolution 34 (4): 980-996 (http://dx.doi.org/10.1093/molbev/msx050) (GT Biologie, écologie et évolution des espèces envahissantes)

Gautier M., Klassmann A. & Vitalis R. 2017. REHH 2.0: a reimplementation of the R package REHH to detect positive selection from haplotype structure. Molecular Ecology Resources 17: 78-90 (10.1111/1755-0998.12634) (GT Génomique statistique et évolutive des populations)

Gay P.-E., Lecoq M. & Piou C. 2017. Improving preventive locust management: insights from a multi-agent model. Pest Management Science (published online) (http://dx.doi.org/10.1002/ps.4648) (GT Biologie, écologie et évolution des espèces envahissantes)

Gibon F.M. 2017. The Chimarra lehibemavo species-group, new and endemic to Madagascar (Trichoptera, Philopotamidae). European Journal of taxonomy 319: 1-31 (http://dx.doi.org/10.5852/ejt.2017.319) (GT Origine et caractérisation de la biodiversité)

Gibon F.M. 2017. Presence of the Glossosomatidae in Madagascar, with description of two species (Trichoptera). Zootaxa 4317 (1): 174-178 (http://dx.doi.org/10.11646/zootaxa.4317.1.9) (GT Origine et caractérisation de la biodiversité)

Gibon F.M. 2017. The Chimarra of the georgensis and fallax species groups in Madagascar (Trichoptera, Philopotamidae). Oriental Insects  (http://dx.doi.org/10.1080/00305316.2017.1379448) (GT Origine et caractérisation de la biodiversité)

Godefroid M., Tixier P., Chabrier C., Djigal D. & Queneherve P. 2017. Associations of soil type and previous crop with plant-feeding nematode communities in plantain agrosystems. Applied Soil Ecology 113: 63-70 (http://dx.doi.org/10.1016/j.apsoil.2017.01.012) (GT Origine et caractérisation de la biodiversité)

Gouin A., Bretaudeau A., Nam K., Gimenez S., Aury J.-M., Duvic B., Hilliou F., Durand N., Montagné N., Darboux I., Kuwar S., Chertemps T., Siaussat D., Bretschneider A., Moné Y., Ahn S.-J., Hänniger S., Gosselin Grenet A.-S., Neunemann D., Maumus F., Luyten I., Labadie K., Xu W., Koutroumpa F., Escoubas J.-M., Llopis A., Maïbèche M., Salasc F., Tomar A., Anderson A., Khan S.A., Dumas P., Orsucci M., Guy J., Belser C., Alberti A., Noel B., Couloux A., Mercier J., Nidelet S., Dubois E., Liu N.-Y., Boulogne I., Mirabeau O., Le Goff G., Gordon K., Oakeshott J., Consoli F., Volkoff A.-N., Fescemyer H., Marden J., Luthe D., Herrero S., Heckel D., Wincker P., Kergoat G.J., Amselem J., Quesneville H., Groot A., Jacquin-Joly E., Nègre N., Lemaitre C., Legeai F., d'Alençon E. & Fournier P. 2017. Two genomes of highly polyphagous lepidopteran pests (Spodoptera frugiperda, Noctuidae) with different host-plant ranges. Scientific Reports (accepté) (GT Origine et caractérisation de la biodiversité)

Guivier E., Martin J.F., Pech N., Ungaro A., Chappaz R. & Gilles A. 2017. Microbiota diversity within and between the tissues of two wild interbreeding species. Microbial Ecology (published online) (http://dx.doi.org/10.1007/s00248-017-1077-9) (GT Origine et caractérisation de la biodiversité)

Haran J., Rousselet J., Tellez D., Roques A. & Roux G. 2017. Phylogeography of Monochamus galloprovincialis, the European vector of the pinewood nematode. Journal of Pest Science  (sous presse) (http://dx.doi.org/10.1007/s10340-017-0878-4) (GT Origine et caractérisation de la biodiversité)

Haran J., Schuette A. & Friedman A.L.L. 2017. A review of Smicronyx Schoenherr (Coleoptera, Curculionidae) of Israel, with description of two new species. Zootaxa 4237 (1): 17-40 (http://dx.doi.org/10.11646/zootaxa.4237.1.2) (GT Origine et caractérisation de la biodiversité)

Harrison R.D., Chong K.Y., Pham N.M., Yee A.T.K., Yeo C.K., Tan H.T.W. & Rasplus J.Y. 2017. Pollination of Ficus elastica: India rubber re-establishes sexual reproduction in Singapore. Scientific Reports 7: 11616  (http://dx.doi.org/10.1038/s41598-017-09873-z) (GT Origine et caractérisation de la biodiversité)

Hudson L. N., Newbold T., Contu S., Hill S. L. L., Lysenko I., De Palma A., ... Granjon L.,...  Purvis A. (515 signataires). 2017. The database of the PREDICTS (Projecting Responses of Ecological Diversity In Changing Terrestrial Systems) project. Ecology and Evolution 7: 145–188.  (http://dx.doi.org/10.1002/ece3.2579) (GT Origine et caractérisation de la biodiversité)

Ibanez S., Millery A., D’Ottavio M., Guilhot R. & Vesin E. 2017. Phosphorus-rich grasshoppers consume plants high in nitrogen and phosphorus. Ecological Entomology (sous presse) (http://dx.doi.org/10.1111/een.12425)(GT Adaptation des phytophages, de leurs ennemis naturels et de leurs symbiontes)

Iturralde-Pólit P., Dangles O., Burneo S.F. & Meynard C.N. 2017. Climate change impact on a mega-diverse country: shifts in mammal richness and turnover in continental Ecuador. Biotropica (accepté) (http://dx.doi.org/10.1111/btp.12467) (GT Origine et caractérisation de la biodiversité)

Janšta P., Cruaud A., Delvare G., Heraty J. & Rasplus J.-Y. 2017. Torymidae (Hymenoptera, Chalcidoidea) revised: molecular phylogeny, circumscription and reclassification of the family with discussion of its biogeography and evolution of life-history traits. Cladistics: acceptée (GT Origine et caractérisation de la biodiversité)

Kergoat G.J., Meseguer A.S. & Jousselin E. 2017. Evolution of plant-insect interactions: insights from macroevolutionary approaches in plants and herbivorous insects. Advances in Botanical Research 81: 25-53 (doi:10.1016/bs.abr.2016.09.005) (GT Origine et caractérisation de la biodiversité  ; GT Adaptation des phytophages, de leurs ennemis naturels et de leurs symbiontes)

Kirichenko N., Triberti P., Ohshima I., Haran J., Byun B.K., Li H.H., Augustin S., Roques A. & Lopez-Vaamonde C. 2017. From east to west across the Palearctic: Phylogeography of the invasive lime leaf miner Phyllonorycter issikii (Lepidoptera: Gracillariidae) and discovery of a putative new cryptic species in East Asia. PLoS ONE 12 (2): 22 (http://dx.doi.org/10.1371/journal.pone.0171104) (GT Origine et caractérisation de la biodiversité)

Kreisinger J., Kropackova L., Petrzelkova A., Adamkova M., Tomasek O., Martin J.F., Michalkova R. & Albrecht T. 2017. Temporal stability and the effect of transgenerational transfer on fecal microbiota structure in a long distance migratory bird. Frontiers in Microbiology 8: 19 (http://dx.doi.org/10.3389/fmicb.2017.00050) (GT Origine et caractérisation de la biodiversité)

Leblois R., Gautier M., Rohfritsch A., Foucaud J., Burban C., Galan M., Loiseau A., Sauné L., Branco M., Gharbi K., Vitalis R. & Kerdelhué C. 2018. Deciphering the demographic history of allochronic differentiation in the pine processionary moth Thaumetopoea pityocampa. Molecular Ecology (sous presse) (http://dx.doi.org/10.1111/mec.14411) (GT Adaptation des phytophages, de leurs ennemis naturels et de leurs symbiontes) (PT BM et PT Informatique)

Le Gall L., Delsuc F., Hourdez S., Lecointre G. & Rasplus J.Y. 2017. Toward the DNA library of life. European Journal of Taxonomy 266: 1-9 (doi:10.5852/ejt.2017.266) (GT Origine et caractérisation de la biodiversité)

Le Ru B., Capdevielle-Dulac C., Musyoka B.K., Goftishu M., Assefa Y., Ndemah R., Molo R., Chipabika G., Conlong D., Ong’Amo G. & Kergoat G.J. 2017. Molecular phylogenetics and definition of the Acrapex minima Janse group (Lepidoptera, Noctuidae, Apameini, Sesamiina) with the description of four new species from the Afrotropics. Annales de la Société Entomologique de France (NS) (sous presse) (http://dx.doi.org/10.1080/00379271.2017.1332959) (GT Origine et caractérisation de la biodiversité)

Le Ru B., Capdevielle-Dulac C., Musyoka B.K., Pallangyo B., Njaku M., Goftishu M., Assefa Y., Sezonlin M., Ong’Amo G. & Kergoat G.J. 2017. Phylogeny and systematics of the Acrapex apicestriata (Bethune-Baker) species complex (Lepidoptera, Noctuidae, Noctuinae, Apameini) with the description of eight new species from the Afrotropics. Annales de la Société Entomologique de France (NS) 53: 106-130 (http:/:dx.doi.org/10.1080/00379271.2017.1320586) (GT Origine et caractérisation de la biodiversité)

Le Ru B., Capdevielle-Dulac C., Musyoka B.K., Pallangyo B., Njaku M., Mubenga O., Chipabika G., Ndemah R., Bani G., Molo R., OnG'Amo G. & Kergoat G.J. 2017. Phylogenetic analysis and systematics of the Acrapex unicolora Hampson species complex (Lepidoptera, Noctuidae, Noctuinae, Apameini), with the description of five new species from the Afrotropics. European Journal of Taxonomy 270: 1-36 (http://dx.doi.org/10.5852/ejt.2017.270) (GT Origine et caractérisation de la biodiversité)

Lippens C., Estoup A., Hima M.K., Loiseau A., Tatard C., Dalecky A., Bâ K., Kane M., Diallo M., Sow A., Niang Y., Piry S., Berthier K., Leblois R., Duplantier J.M. & Brouat C. 2017. Genetic structure and invasion history of the house mouse (Mus musculus domesticus) in Senegal, West Africa: a legacy of colonial and contemporary times (GT4). Heredity 119 (2): 64-75 (10.1038/hdy.2017.18)(GT Biologie, écologie et évolution des espèces envahissantes)

Liu Y., Rasplus J.Y., Van Noort S., Li Z. & Huang D.W. 2017. Sycidiphaga, a new genus of Sycophaginae Walker, 1975 (Hymenoptera, Chalcidoidea, Agaonidae) associated with Ficus subgenus Sycidium in southern China. Zootaxa 4306 (1): 91-107 (http://dx.doi.org/10.11646/zootaxa.4306.1.5) (GT Origine et caractérisation de la biodiversité)

Maggia M.E., Vigouroux Y., Renno J.F., Duponchelle F., Desmarais E., Nunez J., Garcia-Davila C., Carvajal-Vallejos F.M., Paradis E., Martin J.F. & Mariac C. 2017. DNA Metabarcoding of Amazonian Ichthyoplankton Swarms. PLoS ONE 12 (1): 14 (http://dx.doi.org/10.1371/journal.pone.0170009) (e0170009) (GT Origine et caractérisation de la biodiversité)

Manfio D., Jorge I.R., Kergoat G.J. & Ribeiro-Costa C.S. 2017. Morphology-based phylogeny of the genus Ctenocolum Kingsolver & Whitehead (Coleoptera, Chrysomelidae, Bruchinae), with descriptions of three new species. Insect Systematics and Evolution (accepté) (GT Origine et caractérisation de la biodiversité)

Manirakiza J., Hatungumukama G., Thévenon S., Gautier M., Besbes B., Flori L. & Detilleux J. 2017. Effect of genetic European taurine ancestry on milk yield of Ankole-Holstein crossbred dairy cattle in mixed smallholders system of Burundi highlands. Animal Genetics (sous presse) (hors GT)

Marchal L., Cazères S., Kergoat G.J., Letellier K., Mitchell A., Nattier R. & Mille C. 2017. A new pest of lychees in New Caledonia. New Zealand Journal of Zoology (sous presse) (doi:10.1080/03014223.2016.1250787) (GT Origine et caractérisation de la biodiversité)

Marcussen T. & Meseguer A.S. 2017. Species-level phylogeny, fruit evolution and diversification history of Geranium (Geraniaceae). Molecular Phylogenetics and Evolution 110: 134-149 (http://dx.doi.org/10.1016/j.ympev.2017.03.012)(hors GT)

Mboup P.A., Konate K. & Le Fur J. 2017. A multi-world agent-based model working at several spatial and temporal scales for simulating complex geographic systems. Procedia Computer Science 108: 968-977 (http://dx.doi.org/10.1016/j.procs.2017.05.090)

Mergey M., Bardonnet C., Quintaine T., Galan M., Bodin C., Hubert P. & Helder R. 2017. Identifying environmental drivers of spatial genetic structure of the European pine marten (Martes martes). Landscape Ecology (sous presse) (http://dx.doi.org/10.1007/s10980-017-0567-y)(GT Approches moléculaires et bioinformatiques haut débit)

Merle C., Leblois R., Rousset F. & Pudlo P. 2017. Resampling: An improvement of importance sampling in varying population size models. Theoretical Population Biology 114: 70-87 (http://dx.doi.org/10.1016/j.tpb.2016.09.002)(GT Génomique statistique et évolutive des populations)

Meseguer A., Manzano-Marin A., Coeur d'acier A., Clamens A.L., Godefroid M. & Jousselin, E. 2017. Buchnera has changed flatmate but the repeated replacement of co-obligate symbionts is not associated with the ecological expansions of their aphid hosts. Molecular Ecology (sous presse) (doi:10.1111/mec.13910) (GT Adaptation des phytophages, de leurs ennemis naturels et de leurs symbiontes)

Meynard C.N., Gay P.E., Lecoq M., Foucart A., Piou C. & Chapuis M.P. 2017. Climate-driven geographic distribution of the desert locust during recession periods : Subspecies’ niche differentiation and relative risks under scenarios of climate change. Global Change Biology (accepté) (http://dx.doi.org/10.1111/gcb.13739) (GT Biologie, écologie et évolution des espèces envahissantes)

Michel B., Clamens A.L., Bethoux O., Kergoat G.J. & Condamine F.L. 2017. A first time-calibrated phylogeny of antlions (Neuroptera: Myrmeleontidae). Molecular Phylogenetics and Evolution (accepté) (GT Origine et caractérisation de la biodiversité)

Molina C.I., Gibon F.M., Dominguez E., Pape T. & Rønsted N. 2017. Associating immatures and adults of aquatic insects using DNA barcoding in high Andean streams. Ecologia en Bolivia 52 (2): 88-99 (GT Origine et caractérisation de la biodiversité)

Mouttet R., Streito J.C., Genson G. & Germain J.F. 2017. Molecular evidence supports the recognition of Epitrix papa as a distinct species from Epitrix similaris. Bulletin OEPP/EPPO Bulletin (sous presse)(GT Origine et caractérisation de la biodiversité)

Mutisya D.L., El-Banhawy E.S.M., Vicente dos Santos V., Kariuki C.W., Khamala C.P.M. & Tixier M.S. 2017. Predatory phytoseiid mites associated with cassava in Kenya, identification key and molecular diagnosis (Acari: Phytoseiidae).Acarologia 57 (3): 541-554 (10.24349/acarologia/20174172) (GT Origine et caractérisation de la biodiversité)

Navascués M., Leblois R. & Burgarella C. 2017. Demographic inference through approximate-Bayesian-computation skyline plots. Peer Journal 5: e3530
(http://dx.doi.org/10.7717/peerj.3530) (GT Génomique statistique et évolutive des populations)

Orsucci M., Navajas M. & Fellous S. 2017. Genotype-specific interactions between parasitic arthropods. Heredity (accepté) (doi:10.1038/hdy.2016.90) (GT Adaptation des phytophages, de leurs ennemis naturels et de leurs symbiontes)

Petrucco-Toffolo E., Basso A., Kerdelhué C., Ipekdal K., Mendel Z., Simonato M. & Battisti A. 2017. Evidence of potential hybridization in the Thaumetopoea pityocampa-wilkinsoni complex. Agricultural and Forest Entomology (sous presse) (http://dx.doi.org/10.1111/afe.12224) (GT Origine et caractérisation de la biodiversité)

Plantamp P., Estragnat V., Fellous S., Desouhant E. & Gibert P. 2017. Where and what to feed? Differential effects on fecundity and longevity in the invasive Drosophila suzukii. Basic and Applied Ecology  19: 56-66 (http://dx.doi.org/10.1016/j.baae.2016.10.005) (GT Biologie, écologie et évolution des espèces envahissantes)

Popkin M., Piffaretti J., Clamens A.L., Qiao G.X., Chen J., Vitalis R., Vanlerberghe-Masutti F., Gupta R.K., Lamaari M., Langella O., Coeur d'acier A. & Jousselin E. 2017. Large-scale phylogeographic study of the cosmopolitan aphid pest Brachycaudus helichrysi reveals host plant associated lineages that evolved in allopatry Biological Journal of the Linnean Society 120 (1): 102-114 (http//dx.doi.org/10.1111/bij.12869) (GT Origine et caractérisation de la biodiversité ; GT Adaptation des phytophages, de leurs ennemis naturels et de leurs symbiontes ; PT BM)

Ratnadass A., Randriamanantsoa R., Aberlenc H.P., Rafamatanantsoa E., Rajaonera T.E. & Letourmy P. 2017. Impacts of some cropping systems on the abundance of soilborne insect pests and damage to upland rice. Applied Soil Ecology (sous presse) (GT Origine et caractérisation de la biodiversité)

Ribas A., Diagne C., Tatard C., Diallo M., Poonlaphdecha S. & Brouat C. 2017. Whipworm diversity in West African rodents: a molecular approach and the description of Trichuris duplantieri n. sp (Nematoda: Trichuridae). Parasitology Research 116 (4): 1265-1271 (http://dx.doi.org/10.1007/s00436-017-5404-3) (GT Origine et caractérisation de la biodiversité)

Richard D., Ravigne V., Rieux A., Facon B., Boyer C., Boyer K., Grygiel P., Javegny S., Terville M., Canteros B.I., Robene I., Verniere C., Chabirand A., Pruvost O. & Lefeuvre P. 2017. Adaptation of genetically monomorphic bacteria: evolution of copper resistance through multiple horizontal gene transfers of complex and versatile mobile genetic elements. Molecular Ecology 26 (7): 2131-2149 (http://dx.doi.org/10.1111/mec.14007) (hors GT)

Rocha S., Kerdelhué C., Ben Jamaa M.L., Dhahri S., Burban C. & Branco M. 2017. Effect of heat waves on embryo mortality in the pine processionary moth. Bulletin of Entomological Research 107 (5): 583-591 (10.1017/S0007485317000104) (GT Adaptation des phytophages, de leurs ennemis naturels et de leurs symbiontes)

Rodriguez L.J., Young F., Rasplus J.Y., Kjellberg  F. & Compton S.G. 2017. Constraints on convergence: Hydrophobic hind legs allow some male pollinator fig wasps early access to submerged females. Journal of Natural History 51: 761-782 (GT Origine et caractérisation de la biodiversité)

Rodriguez L.J., Bain A., Chou L.S., Conchou L., Cruaud A., Gonzales R., Hossaert-McKey M., Rasplus J.Y., Tzeng H.Y. & Kjellberg F. 2017. Diversification and spatial structuring in the mutualism between Ficus septica and its pollinating wasps in insular South East Asia. BMC Evolutionary Biology 17: 207 (http://dx.doi.org/10.1186/s12862-017-1034-8) (GT Origine et caractérisation de la biodiversité)

Roman-Ruiz A.K., Michel B., Dufour B.P., Rojas J.C., Cruz-Lopez L. & Barrera J.F. 2017. Description of the sperm and spermatheca of Hypothenemus hampei (Coleoptera: Curculionidae: Scolytinae) for the differentiation of mated and unmated females. Annals of the Entomological Society of America 110 (4): 353-359(http://dx.doi.org/10.1093/aesa/sax033) (GT Origine et caractérisation de la biodiversité)

Rombaut A., Guilhot R., Xuéreb A., Benoit L., Chapuis M.P., Gibert P. & Fellous S. 2017. Invasive Drosophila suzukii facilitates Drosophila melanogaster infestation and sour rot outbreaks in the vineyards. Royal Society Open Science 4: 170117 (http://dx.doi.org/10.1098/rsos.170117) (GT Biologie, écologie et évolution des espèces envahissantes)

Rossi J.-P., Imbault V., Lamant T. & Rousselet J. 2017. An inventory of coniferous urban trees in the city of Orléans (France) Data in Brief (sous presse) (doi:10.1016/j.dib.2016.10.015) (GT Origine et caractérisation de la biodiversité)

Rossi J.P., Kadaouré I., Godefroid M. & Dobigny G. 2017. Landscape epidemiology in urban environments: The example of rodent-borne Trypanosoma in Niamey, Niger. Infection, Genetics and Evolution (sous presse) (http://dx.doi.org/10.1016/j.meegid.2017.10.006 )(GT Ecologie et évolution des zoonoses & GT Origine et caractérisation de la biodiversité)

Santamaria M.E., Auger P., Martinez M., Migeon A., Castañera P., Diaz I., Navajas M. & Ortego F. 2017. Host plant use by two distinct lineages of the tomato red spider mite, Tetranychus evansi, differing in their distribution range. Journal in Pest Science (sous presse)

Sereno D., Akhoundi M., Dorkeld F., Oury B., Momen H. & Perrin P. 2017. What pre-Columbian mummies could teach us about South American leishmaniases ?  Pathogens and Disease (accepté) (http://dx.doi.org/10.1093/femspd/ftx019) (GT Approches moléculaires et bioinformatiques haut débit)

Soldati L., Condamine F.L., Clamens A.L. & Kergoat G.J. 2017. Documenting tenebrionid diversity: progress on Blaps Fabricius (Coleoptera, Tenebrionidae, Tenebrioninae, Blaptini) systematics, with the description of five new species. European Journal of Taxonomy (sous presse) (http://dx.doi.org/10.5852/ejt.2017.282) (GT Origine et caractérisation de la biodiversité ;  PT Collections ; PT Biologie Moléculaire ; PT informatique)

Soldati L., Condamine F.L., Clamens A.L., Mogia M. & Kergoat G.J. 2017. The Tenebrionidae (Insecta, Coleoptera) of Mount Wilhelm and Wanang, with description of a new species and a preliminary phylogeny of Stenochiinae. Mémoires du Muséum national d'Histoire naturelle 209: 1-31 (GT Origine et caractérisation de la biodiversité ; PT Collections ; PT Biologie moléculaire ; PT Informatique)

Streito J.C., Clouet C., Hamdi F. & Gauthier N. 2017. Population genetic structure of Macrolophus pygmaeus in Mediterranean agroecosystems. Insect Science (sous presse) (GT Origine et caractérisation de la biodiversité)

Tatard C., Garba M., Gauthier P., Hima K., Artige E., Dossou D.K.H.J., Gagaré S., Genson G., Truc P. & Dobigny G. 2017. Rodent-borne Trypanosoma from cities and villages of Niger and Nigeria: a special role for the invasive genus Rattus? Acta Tropica (sous presse) (GT Ecologie et évolution des zoonoses)

Tixier M.S., Dos Santos Vicente V., Douin M., Duso C. & Kreiter S. 2017. Great molecular variation within the species Phytoseius finitimus (Acari: Phytoseiidae): implications for diagnosis decision within the mite family Phytoseiidae. Acarologia 57(3): 493-515 (http://dx.doi.org/10.24349/acarologia/20174168) (GT Origine et caractérisation de la biodiversité)

Villette P., Afonso E., Couval G., Levret A., Galan M., Tatard C., Cosson J.F. & Giraudoux P. 2017. Consequences of organ choice in describing bacterial pathogen assemblages in a rodent population. Epidemiology and Infection (accepté) (GT Ecologie et évolution des zoonoses et GT Approches moléculaires et bioinformatiques haut débit)

Vicente N., Kergoat G.J., Dong J., Yotoko K., Legendre F., Nattier R. & Robillard T. 2017. In and out of the Neotropics: Historical biogeography of Eneopterinae crickets. Journal of Biogeography (sous presse) (http://dx.doi.org/10.1111/jbi.13026) (GT Origine et caractérisation de la biodiversité)

Winternitz J., Abbate J.L., Huchard E., Havlicek J. & Garamszegi L.Z. 2017. Patterns of MHC-dependent mate selection in humans and nonhuman primates: a meta-analysis. Molecular Ecology 26 (2): 668-688 (http://dx.doi.org/10.1111/mec.13920) (hors GT)

Zaldívar-Riverón A., S.A. B., Meza-Lázaro R., Pedraza-Lara C., García-París M. & Meseguer A.S. 2017. Species delimitation, global phylogeny and historical biogeography of the parasitoid wasp genus Spathius (Braconidae: Doryctinae) reveal multiple Oligocene–Miocene intercontinental dispersal events. Zoological Journal of the Linnean Society  (http://dx.doi.org/10.1093/zoolinnean/zlx050) (GT Origine et caractérisation de la biodiversité)

Non peer-reviewed or non referenced journal articles

Germain J.F., Lemmet S., Balmès V. & Streito J.C. 2017. Incursion d’un nouvel aleurode nuisible aux ficus en France. Phytoma 705: 9-11 (GT Origine et caractérisation de la biodiversité)

Haran J. 2017. Genus transfer for the species Afrosmicronyx clavofulvus Hoffmann, 1962 (Curculionidae, Curculioninae), and biogeographic implications. Snudebiller 18 (560): 3 pp.

Kreiter S., Kazakou E., Bonafos R., Plantegenest M. & Gout L. 2017. Un master européen pour la protection des plantes Le programme Erasmus + Plant Health, proposé par quatre pays européens dont la France, réunit des étudiants du monde entier. Les inscriptions sont ouvertes! Phytoma 706: 48-51

Books or book sections

Delvare G. 2017. Order Hymenoptera family Chalcididae.  Arthropod Fauna of the UAE volume 6, Abu Dhabi: Dar Al Ummah, pp. 225-274.

Estoup A., Verdu P., Marin J.M., Pudlo P., Dehne-Garcia A. & Robert C.P. 2017. Application of approximate Bayesian computation to infer the genetic history of Pygmy hunter-gatherers populations from Western Central Africa. In: Sisson S., Fan Y. & Beaumont M., eds. Approximate Bayesian Computation: CRC press Taylor & Francis group (sous presse)

Marin J.M., Pudlo P., Estoup A. & Robert C.P. 2017. Likelihood-free model choice In: Sisson S., Fan Y. & Beaumont M., eds. Approximate Bayesian Computation: CRC press Taylor & Francis group (sous presse).

Roderick G.K. & Navajas M. 2017. Effects of biological invasions on pest management. In: Eds. Coll .M.& Wajnberg.E., eds. Environmental pest management : challenges for agronomists, ecologists, economists and policymakers: Wiley, pp. 225-248.

Guest conferences
Published communications

Le Fur J., Mboup P.A. & Sall M. 2017. A simulation model for integrating multidisciplinary knowledge in natural sciences. Heuristic and application to wild rodent studies. Proc. 7th Internat. Conf. Simul. and Model. Method., Technol. and Applic. (Simultech), Madrid, july 2017: 340-347 (GT Biologie, écologie et évolution des espèces envahissantes)

Talks

Clemente F., Gautier M. & Vitalis R. 2017. Estimation of the sex-ratio in population trees from allele frequency data. Mathematical and Computational Evolutionary Biology 2017 (MCEB 2017), Porquerolles Island, France, 12-16 juin 2017.

Godefroid M., Rocha S., Santos H., Paiva M.R., Burban C., Kerdelhué C., Branco M., Rasplus J.Y. & Rossi J.P. 2017. Niche shift induced by allochronic speciation: implications for forecasting the response of the pine processionary moth to global change.Joint Meeting of IUFRO's WP 7.03.05 & WP 7.03.10 Forest Insects and Pathogens in a Changing Environment: Ecology, Monitoring & Genetics, Thessaloniki, Greece, 11-15 September 2017.

Kerdelhué C. 2017. Using population genetics and genomic approaches to decipher the recent history of forest pest insects : invasions, expansions, and more.Joint Meeting of IUFRO's WP 7.03.05 & WP 7.03.10 Forest Insects and Pathogens in a Changing Environment: Ecology, Monitoring & Genetics, Thessaloniki, Greece, 11-15 September 2017.

Rousselet J., Laparie M., Robinet C., Roques A., Bernard A., Kerdelhué C., Rossi J.P., Buradino M., Bocheva L., Zaemdzhikova G., Georgieva M., Tsankov G., Georgiev G. & Mirchev P. 2017. Phenological changes in the pine processionary moth: possible causes, consequences and up-and-coming monitoring methods.Joint Meeting of IUFRO's WP 7.03.05 & WP 7.03.10 Forest Insects and Pathogens in a Changing Environment: Ecology, Monitoring & Genetics, Thessaloniki, Greece, 11-15 September 2017.

Simonato M., Auger-Rozenberg M.A., Pilati M., Sauné L., Magnoux E., Courtin C., Kerdelhué C. & Rousselet J. 2017. Patterns of expansion of pine processionary moth and its specialist egg parasitoid at the northern edge of its distributional range. IUFRO 125th Anniversary Congress, Freiburg, Germany, 18-22 September 2017.

Posters

Godefroid M., Meurisse N., Kerdelhué C. & Rossi J.P. 2017. Response of the invasive oak processionary moth to ongoing climate change.Joint Meeting of IUFRO's WP 7.03.05 & WP 7.03.10 Forest Insects and Pathogens in a Changing Environment: Ecology, Monitoring & Genetics, Thessaloniki, Greece, 11-15 September 2017.

Hivert V., Gautier M. & Vitalis R. 2017. A hierarchical bayesian model for measuring the extent of local adaptation from haplotype data. Mathematical and Computational Evolutionary Biology 2017 (MCEB 2017), Porquerolles Island, France, 12-16 juin 2017.

Petsopoulos D., Memtsas G., Leblois R., Sauné L., Ipekdal K., Aravanopoulos P.A., Kerdelhué C. & Avtzis D.N. 2017. A first insight into the phylogeography of Thaumetopoea wilkinsoni in Crete.Joint Meeting of IUFRO's WP 7.03.05 & WP 7.03.10 Forest Insects and Pathogens in a Changing Environment: Ecology, Monitoring & Genetics, Thessaloniki, Greece, 11-15 September 2017.

Supervising Researches Ability

Theses
Mboup P.A. 2017. Un meta-modèle multi-monde et multi-échelle pour la simulation à base d’agents de systèmes complexes présentant des phénomènes historiques et géographiques : Application à l’étude de la diffusion du rat noir au Sénégal. Doctorat en Informatique. Dakar: Université Cheick Anta Diop. 147 pp.

Vicente V. 2017. Étude des relations phylogénétiques entre les genres de Phytoseiidae (Acari : Mesostigmata) et implications pour la lutte biologique. Thèse, Montpellier: Montpellier SupAgro, 28 avril.

Other productions